Publications in 2024
Cell Systems - 2024
CheXmask: a large-scale dataset of anatomical segmentation masks for multi-center chest x-ray images
Scientific Data, Number 1, page 511 - 2024
Class imbalance on medical image classification: towards better evaluation practices for discrimination and calibration performance
European Radiology - jun 2024
Demographically-Informed Prediction Discrepancy Index: Early Warnings of Demographic Biases for Unlabeled Populations
Transactions on Machine Learning Research - 2024
Briefings in Bioinformatics, Volume 25, Number 3 - 2024
Computers in Biology and Medicine, Volume 183, page 109234 - 2024
IEEE Trans. on Neural Systems and Rehab. Eng. - 2024
Briefings in Bioinformatics, Volume 25, Number 4 - 2024
Publications in 2023
Biosystems Engineering, Volume 229, page 69-84 - 2023
Publications in 2022
Briefings in Bioinformatics - feb 2022
Network Neuroscience, page 1--17 - jan 2022
IEEE/ACM Transactions on Computational Biology and Bioinformatics, page 1--10 - 2022
Bioinformatics - aug 2022
Improving anatomical plausibility in medical image segmentation via hybrid graph neural networks: applications to chest x-ray analysis
IEEE Transactions on Medical Imaging - 2022
arXiv preprint arXiv:2211.07395 - 2022
Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches
Briefing in Bioinformatics - 2022
IEEE Transactions on Biomedical Engineering, Volume 69, Number 2, page 807--817 - feb 2022
Publications in 2021
ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture
GigaScience, Volume 10, Number 7 - 2021
Machine Learning with Applications, Volume 6 - 2021