Milone, D. H.'s publications with sinc(i)

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Publications in 2025
Comprehensive benchmarking of large language models for RNA secondary structure prediction   sinc_ZBGDSM25.doi sinc_ZBGDSM25.pdf
L. Zablocki, L. A. Bugnon, M. Gerard, L. Di Persia, G. Stegmayer, D. H. Milone
Briefings in Bioinformatics, Volume 26, Number 2 - 2025
 
Publications in 2024
An efficient, not-only-linear correlation coefficient based on clustering   sinc_PRMG24.doi sinc_PRMG24.pdf
M. Pividori, M. Ritchie, D. H. Milone, C. Greene
Cell Systems - 2024
CheXmask: a large-scale dataset of anatomical segmentation masks for multi-center chest x-ray images   sinc_GMMSAMF24.doi sinc_GMMSAMF24.pdf
N. Gaggion, C. Mosquera, L. Mansilla, J. Saidman, M. Aineseder, D. H. Milone, E. Ferrante
Scientific Data, Number 1, page 511 - 2024
Class imbalance on medical image classification: towards better evaluation practices for discrimination and calibration performance   sinc_MFMLF24.doi sinc_MFMLF24.pdf
C. Mosquera, L. Ferrer, D. H. Milone, D. Luna, E. Ferrante
European Radiology - jun 2024
Demographically-Informed Prediction Discrepancy Index: Early Warnings of Demographic Biases for Unlabeled Populations   sinc_MCEMF24.doi sinc_MCEMF24.pdf
L. Mansilla, E. Claucich, R. Echeveste, D. H. Milone, E. Ferrante
Transactions on Machine Learning Research - 2024
Evaluating large language models for annotating proteins   sinc_VBFMS24.doi sinc_VBFMS24.pdf
R. Vitale, L. A. Bugnon, E. Fenoy, D. H. Milone, G. Stegmayer
Briefings in Bioinformatics, Volume 25, Number 3 - 2024
gGN: Representing the Gene Ontology as low-rank Gaussian distributions   sinc_ESM24.doi sinc_ESM24.pdf
A. Edera, G. Stegmayer, D. H. Milone
Computers in Biology and Medicine, Volume 183, page 109234 - 2024
Neurophysiologically meaningful motor imagery EEG simulation with applications to data augmentation   sinc_GSMP24.doi sinc_GSMP24.pdf
C. Galván, R. Spies, D. H. Milone, V. Peterson
IEEE Trans. on Neural Systems and Rehab. Eng. - 2024
sincFold: end-to-end learning of short- and long-range interactions in RNA secondary structure   sinc_BDGRPFCASM24.doi sinc_BDGRPFCASM24.pdf
L. A. Bugnon, L. Di Persia, M. Gerard, J. Raad, S. Prochetto, E. Fenoy, U. Chorostecki, F. Ariel, G. Stegmayer, D. H. Milone
Briefings in Bioinformatics, Volume 25, Number 4 - 2024
 
Publications in 2023
SincFold: a new tool for RNA folding based on deep learning   sinc_BDGRPFCASM23.pdf
L. A. Bugnon, L. Di Persia, M. Gerard, J. Raad, S. Prochetto, E. Fenoy, U. Chorostecki, F. Ariel, G. Stegmayer, D. H. Milone
A2B2C 13th Meeting - 2023
Transfer learning: The key to functionally annotate the protein universe   sinc_BFERSM23.doi sinc_BFERSM23.pdf
L. A. Bugnon, E. Fenoy, A. Edera, J. Raad, G. Stegmayer, D. H. Milone
Patterns - 2023
Using segment-based features of jaw movements to recognise foraging activities in grazing cattle   sinc_CVRGUPAMGR23.doi sinc_CVRGUPAMGR23.pdf
J. O. Chelotti, S. R. Vanrell, L. Rau, J. Galli, S.A Utsumi, A. M. Planisich, S. Almirón, D. H. Milone, L. Giovanini, H. L. Rufiner
Biosystems Engineering, Volume 229, page 69-84 - 2023
 
Publications in 2022
Anc2vec: embedding gene ontology terms by preserving ancestors relationships   sinc_EMS22.doi sinc_EMS22.pdf
A. Edera, D. H. Milone, G. Stegmayer
Briefings in Bioinformatics - feb 2022
Bridging physiological and perceptual views of autism by means of sampling-based Bayesian inference   sinc_EFMS22.doi sinc_EFMS22.pdf
R. Echeveste, E. Ferrante, D. H. Milone, I. Samengo
Network Neuroscience, page 1--17 - jan 2022
exp2GO: improving prediction of functions in the Gene Ontology with expression data   sinc_DLAMS22.doi sinc_DLAMS22.pdf
L. Di Persia, T. López, A. A. Arce, D. H. Milone, G. Stegmayer
IEEE/ACM Transactions on Computational Biology and Bioinformatics, page 1--10 - 2022
Hierarchical deep learning for predicting GO annotations by integrating protein knowledge   sinc_MSMSM22.doi sinc_MSMSM22.pdf
G. Merino, R. Saidi, D. H. Milone, G. Stegmayer, M. Martín
Bioinformatics - aug 2022
Improving anatomical plausibility in medical image segmentation via hybrid graph neural networks: applications to chest x-ray analysis   sinc_GMMMF22.doi sinc_GMMMF22.pdf
N. Gaggion, L. Mansilla, C. Mosquera, D. H. Milone, E. Ferrante
IEEE Transactions on Medical Imaging - 2022
Improving the folding prediction of RNA with deep learning   sinc_BDGERPFSM22.pdf
L. A. Bugnon, L. Di Persia, M. Gerard, A. Edera, J. Raad, S. Prochetto, E. Fenoy, G. Stegmayer, D. H. Milone
A2B2C 12th Meeting - 2022
Multi-center anatomical segmentation with heterogeneous labels via landmark-based models   sinc_GVMF22.doi sinc_GVMF22.pdf
N. Gaggion, M. Vakalopoulou, D. H. Milone, E. Ferrante
arXiv preprint arXiv:2211.07395 - 2022
Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches   sinc_BEPGRFRCGAMS22.doi sinc_BEPGRFRCGAMS22.pdf
L. A. Bugnon, A. Edera, S. Prochetto, M. Gerard, J. Raad, E. Fenoy, M. Rubiolo, U. Chorostecki, G. Gabaldon, F. Ariel, L. Di Persia, D. H. Milone, G. Stegmayer
Briefing in Bioinformatics - 2022

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