@Article{ESM24, author = "Edera, A. and Stegmayer, G. and Milone, D. H.", title = "gGN: Representing the Gene Ontology as low-rank Gaussian distributions", journal = "Computers in Biology and Medicine", volume = "183", pages = "109234", year = "2024", note = "ISSN 0010-4825", url = "http://sinc.unl.loc/sinc/sinc-publications/2024/ESM24" } @Article{BFERSM23, author = "Bugnon, L. A. and Fenoy, E. and Edera, A. and Raad, J. and Stegmayer, G. and Milone, D. H.", title = "Transfer learning: The key to functionally annotate the protein universe", journal = "Patterns", year = "2023", url = "http://sinc.unl.loc/sinc/sinc-publications/2023/BFERSM23" } @Article{EMS22, author = "Edera, A. and Milone, D. H. and Stegmayer, G.", title = "Anc2vec: embedding gene ontology terms by preserving ancestors relationships", journal = "Briefings in Bioinformatics", month = "feb", year = "2022", note = "bbac003", url = "http://sinc.unl.loc/sinc/sinc-publications/2022/EMS22" } @Article{BEPGRFRCGADMS22, author = "Bugnon, L. A. and Edera, A. and Prochetto, S. and Gerard, M. and Raad, J. and Fenoy, E. and Rubiolo, M. and Chorostecki, U. and Gabaldon, G. and Ariel, F. and Di Persia, L. and Milone, D. H. and Stegmayer, G.", title = "Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches", journal = "Briefing in Bioinformatics", year = "2022", url = "http://sinc.unl.loc/sinc/sinc-publications/2022/BEPGRFRCGADMS22" } @Article{FES22, author = "Fenoy, E. and Edera, A. and Stegmayer, G.", title = "Transfer learning in proteins: evaluating novel protein learned representations for bioinformatics tasks", journal = "Briefings in Bioinformatics", number = "4", volume = "23", year = "2022", url = "http://sinc.unl.loc/sinc/sinc-publications/2022/FES22" } @Article{ESSM21, author = "Edera, A. and Small, I. and Sanchez-Puerta, M. and Milone, D. H.", title = "Deepred-Mt: Deep representation learning for predicting C-to-U RNA editing in plant mitochondria", journal = "Computers in Biology and Medicine", year = "2021", url = "http://sinc.unl.loc/sinc/sinc-publications/2021/ESSM21" }