@Article{BFERSM23,
  author       = "Bugnon, L. A. and Fenoy, E. and Edera, A. and Raad, J. and Stegmayer, G. and Milone, D. H.",
  title        = "Transfer learning: The key to functionally annotate the protein universe",
  journal      = "Patterns",
  year         = "2023",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2023/BFERSM23"
}
@Article{BEPGRFRCGADMS22,
  author       = "Bugnon, L. A. and Edera, A. and Prochetto, S. and Gerard, M. and Raad, J. and Fenoy, E. and Rubiolo, M. and Chorostecki, U. and Gabaldon, G. and Ariel, F. and Di Persia, L. and Milone, D. H. and Stegmayer, G.",
  title        = "Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches",
  journal      = "Briefing in Bioinformatics",
  year         = "2022",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2022/BEPGRFRCGADMS22"
}
@Article{BRMYAMS21,
  author       = "Bugnon, L. A. and Raad, J. and Merino, G. and Yones, C. and Ariel, F. and Milone, D. H. and Stegmayer, G.",
  title        = "Deep Learning for the discovery of new pre-miRNAs: helping the fight against COVID-19",
  journal      = "Machine Learning with Applications",
  volume       = "6",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/BRMYAMS21"
}
@Article{YRBMS21,
  author       = "Yones, C. and Raad, J. and Bugnon, L. A. and Milone, D. H. and Stegmayer, G.",
  title        = "High precision in microRNA prediction: a novel genome-wide approach with convolutional deep residual networks",
  journal      = "Computers in Biology and Medicine",
  volume       = "134",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/YRBMS21"
}
@Article{RBMS21,
  author       = "Raad, J. and Bugnon, L. A. and Milone, D. H. and Stegmayer, G.",
  title        = "miRe2e: a full end-to-end deep model based on transformers for prediction of pre-miRNAs",
  journal      = "Bioinformatics",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/RBMS21"
}
@Article{RSM20,
  author       = "Raad, J. and Stegmayer, G. and Milone, D. H.",
  title        = "Complexity measures of the mature miRNA for improving pre-miRNAs prediction",
  journal      = "Bioinformatics",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/RSM20"
}
@Article{BYRGRMPDMS20,
  author       = "Bugnon, L. A. and Yones, C. and Raad, J. and Gerard, M. and Rubiolo, M. and Merino, G. and Pividori, M. and Di Persia, L. and Milone, D. H. and Stegmayer, G.",
  title        = "DL4papers: a deep learning approach for the automatic interpretation of scientific articles",
  journal      = "Oxford Bioinformatics",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/BYRGRMPDMS20"
}
@Article{MRBYKCAMS20,
  author       = "Merino, G. and Raad, J. and Bugnon, L. A. and Yones, C. and Kamenetzky, L. and Claus, J. and Ariel, F. and Milone, D. H. and Stegmayer, G.",
  title        = "Novel SARS-CoV-2 encoded small RNAs in the passage to humans",
  journal      = "Bioinformatics",
  month        = "11",
  year         = "2020",
  note         = "btaa1002",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/MRBYKCAMS20"
}
@InProceedings{BYRGRMPDMS19,
  author       = "Bugnon, L. A. and Yones, C. and Raad, J. and Gerard, M. and Rubiolo, M. and Merino, G. and Pividori, M. and Di Persia, L. and Milone, D. H. and Stegmayer, G.",
  title        = "Deep learning for reading and interpreting biomedical papers",
  booktitle    = "A2B2C 10th Meeting",
  year         = "2019",
  address      = "Mendoza, Argentina",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYRGRMPDMS19"
}
@Article{BYRMS19,
  author       = "Bugnon, L. A. and Yones, C. and Raad, J. and Milone, D. H. and Stegmayer, G.",
  title        = "Genome-wide hairpins datasets of animals and plants for novel miRNA prediction",
  journal      = "Data in Brief (in press)",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYRMS19"
}
@InProceedings{RMS19,
  author       = "Raad, J. and Milone, D. H. and Stegmayer, G.",
  title        = "Improving pre-miRNA prediction with complexity measures of the mature and deep learning",
  booktitle    = "A2B2C 10th Meeting",
  year         = "2019",
  address      = "Mendoza, Argentina",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/RMS19"
}
@InProceedings{YBRMS19,
  author       = "Yones, C. and Bugnon, L. A. and Raad, J. and Milone, D. H. and Stegmayer, G.",
  title        = "MicroRNA prediction from genome-wide data with deep learning: a novel approach based on convolutional residual networks",
  booktitle    = "A2B2C 10th Meeting",
  year         = "2019",
  address      = "Mendoza, Argentina",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/YBRMS19"
}
@Article{SDRGPYBRRM18,
  author       = "Stegmayer, G. and Di Persia, L. and Rubiolo, M. and Gerard, M. and Pividori, M. and Yones, C. and Bugnon, L. A. and Rodriguez, T. and Raad, J. and Milone, D. H.",
  title        = "Predicting novel microRNA: a comprehensive comparison of machine learning approaches",
  journal      = "Briefings in Bioinformatics",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/SDRGPYBRRM18"
}