@InProceedings{PFLDR23,
  author       = "Perero, J. and Ferrante, E. and Larrateguy, L. and Di Persia, L. and Rufiner, H. L.",
  title        = "Análisis de sesgos en algoritmos de clasificación de oximetría de pulso para detección de trastornos del sueño",
  booktitle    = "Argentine Symposium on Artificial Intelligence (ASAI 2023) - 52 Argentine Conference on Informatics and Operations Research (JAIIO)",
  year         = "2023",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2023/PFLDR23"
}
@Article{REF22,
  author       = "Ricci Lara, M. A. and Echeveste, R. and Ferrante, E.",
  title        = "Addressing fairness in artificial intelligence for medical imaging",
  journal      = "Nature Communications",
  volume       = "13",
  year         = "2022",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2022/REF22"
}
@Article{EFMS22,
  author       = "Echeveste, R. and Ferrante, E. and Milone, D. H. and Samengo, I.",
  title        = "Bridging physiological and perceptual views of autism by means of sampling-based Bayesian inference",
  journal      = "Network Neuroscience",
  pages        = "1--17",
  month        = "jan",
  year         = "2022",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2022/EFMS22"
}
@Article{GMMMF22,
  author       = "Gaggion, N. and Mansilla, L. and Mosquera, C. and Milone, D. H. and Ferrante, E.",
  title        = "Improving anatomical plausibility in medical image segmentation via hybrid graph neural networks: applications to chest x-ray analysis",
  journal      = "IEEE Transactions on Medical Imaging",
  year         = "2022",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2022/GMMMF22"
}
@Article{GVMF22,
  author       = "Gaggion, N. and Vakalopoulou, M. and Milone, D. H. and Ferrante, E.",
  title        = "Multi-center anatomical segmentation with heterogeneous labels via landmark-based models",
  journal      = "arXiv preprint arXiv:2211.07395",
  year         = "2022",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2022/GVMF22"
}
@Article{GADLLRCMCBF21,
  author       = "Gaggion, N. and Ariel, F. and Daric, V. and Lambert, É. and Legendre, S. and Roulé, T. and Camoirano, A. and Milone, D. H. and Crespi, M. and Blein, T. and Ferrante, E.",
  title        = "ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture",
  journal      = "GigaScience",
  number       = "7",
  volume       = "10",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/GADLLRCMCBF21"
}
@MastersThesis{PFA21,
  author       = "Paiva, M. and Ferrante, E. and Albornoz, E. M.",
  title        = "Desarrollo de aplicación móvil para reconocimiento y valoración de cervezas artesanales (Undergraduate project)",
  school       = "Facultad de Ingeniería y Ciencias Hídricas - Universidad Nacional del Litoral",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/PFA21"
}
@InProceedings{MEMF21,
  author       = "Mansilla, L. and Echeveste, R. and Milone, D. H. and Ferrante, E.",
  title        = "Domain Generalization via Gradient Surgery",
  booktitle    = "Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV)",
  pages        = "6630--6638",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/MEMF21"
}
@InProceedings{BEPMFA21,
  author       = "Bourlot, J. and Erbele, G. and Priemer, E. and Martínez, C. E. and Ferrante, E. and Albornoz, E. M.",
  title        = "Generación de mapas de calor de un partido de básquetbol a partir del procesamiento de video",
  booktitle    = "XXVII Congreso Argentino De Ciencias De La Computación (CACIC)",
  year         = "2021",
  address      = "Salta, Argentina",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/BEPMFA21"
}
@InProceedings{GMMF21a,
  author       = "Gaggion, N. and Mansilla, L. and Milone, D. H. and Ferrante, E.",
  title        = "Hybrid Graph Convolutional Neural Networks for Landmark-Based Anatomical Segmentation",
  booktitle    = "Medical Image Computing and Computer Assisted Intervention -- MICCAI 2021",
  pages        = "600--610",
  year         = "2021",
  publisher    = "Springer International Publishing",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/GMMF21a"
}
@Article{NLPMF21,
  author       = "Nieto, N. and Larrazabal, A. and Peterson, V. and Milone, D. H. and Ferrante, E.",
  title        = "On the relationship between research parasites and fairness in machine learning: challenges and opportunities",
  journal      = "GigaScience",
  number       = "12",
  volume       = "10",
  year         = "2021",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2021/NLPMF21"
}
@InProceedings{MNGF20,
  author       = "Matzkin, F. and Newcombe, V. F. J. and Glocker, B. and Ferrante, E.",
  title        = "Cranial Implant Design via Virtual Craniectomy with Shape Priors",
  booktitle    = "Towards the Automatization of Cranial Implant Design in Cranioplasty",
  pages        = "37--46",
  year         = "2020",
  editor       = "Li, Jianning and Egger, Jan",
  publisher    = "Springer International Publishing",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/MNGF20"
}
@Article{LNPMF20,
  author       = "Larrazabal, A. and Nieto, N. and Peterson, V. and Milone, D. H. and Ferrante, E.",
  title        = "Gender imbalance in medical imaging datasets produces biased classifiers for computer-aided diagnosis",
  journal      = "Proceedings of the National Academy of Sciences",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/LNPMF20"
}
@Article{MMF20,
  author       = "Mansilla, L. and Milone, D. H. and Ferrante, E.",
  title        = "Learning deformable registration of medical images with anatomical constraints",
  journal      = "Neural Networks",
  volume       = "124",
  pages        = "269--279",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/MMF20"
}
@Article{MNMKFDWRMG20,
  author       = "Monteiro, M. and Newcombe, V. F. J. and Mathieu, F. and K., Kamnitsas and Ferrante, E. and Das, T. and Adatia, K. and Rueckert, D. and Menon, D. K. and Glocker, B.",
  title        = "Multiclass semantic segmentation and quantification of traumatic brain injury lesions on head CT using deep learning: an algorithm development and multicentre validation study ",
  journal      = "The Lancet Digital Health",
  number       = "6",
  volume       = "2",
  pages        = "314--322",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/MNMKFDWRMG20"
}
@Article{LMGF20,
  author       = "Larrazabal, A. and Martínez, C. E. and Glocker, B. and Ferrante, E.",
  title        = "Post-DAE: Anatomically Plausible Segmentation via Post-Processing with Denoising Autoencoders",
  journal      = "IEEE Transactions on Medical Imaging",
  year         = "2020",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/LMGF20"
}
@InProceedings{MNSKNDSGF20,
  author       = "Matzkin, F. and Newcombe, V. F. J. and Stevenson, S. and Khetani, A. and Newman, T. and Digby, R. and Stevens, A. and Glocker, B. and Ferrante, E.",
  title        = "Self-supervised Skull Reconstruction in Brain CT Images with Decompressive Craniectomy",
  booktitle    = "Medical Image Computing and Computer Assisted Intervention -- MICCAI 2020",
  pages        = "390--399",
  year         = "2020",
  publisher    = "Springer International Publishing",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2020/MNSKNDSGF20"
}
@MastersThesis{FF19,
  author       = "Fernández, E. and Ferrante, E.",
  title        = "Análisis automático de radiografías torácicas por medio de redes neuronales profundas",
  school       = "Facultad de Ciencias Exactas y Naturales - Universidad de Buenos Aires",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/FF19"
}
@InProceedings{LMF19,
  author       = "Larrazabal, A. and Martínez, C. E. and Ferrante, E.",
  title        = "Anatomical Priors for Image Segmentation via Post-Processing with Denoising Autoencoders",
  booktitle    = "MICCAI 2019: International Conference on Medical Image Computing and Computer-Assisted Intervention",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/LMF19"
}
@MastersThesis{MF19,
  author       = "Matzkin, F. and Ferrante, E.",
  title        = "Diseño y desarrollo de una herramienta para la segmentación automática en imágenes TAC de pacientes con traumatismo de cráneo mediante redes neuronales convolucionales. (Undergraduate project) ",
  school       = "Facultad de Ingeniería y Ciencias Hídricas - Universidad Nacional del Litoral",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/MF19"
}
@Article{BPFTBAW19,
  author       = "Bhalodiya, J. and Palit, A. and Ferrante, E. and Tiwari, M. K. and Bhudia, S. K. and Arvanitis, T. N. and Williams, M. A.",
  title        = "Hierarchical Template Matching for 3D Myocardial Tracking and Cardiac Strain Estimation",
  journal      = "Scientific reports",
  number       = "1",
  volume       = "9",
  pages        = "1--13",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/BPFTBAW19"
}
@InProceedings{RFF19,
  author       = "Roulet, N. and Fernandez Slezak, D. and Ferrante, E.",
  title        = "Joint Learning of Brain Lesion and Anatomy Segmentation from Heterogeneous Datasets",
  booktitle    = "Proceedings of The 2nd International Conference on Medical Imaging with Deep Learning",
  series       = "Proceedings of Machine Learning Research",
  volume       = "102",
  pages        = "401-413",
  month        = "08--10 Jul",
  year         = "2019",
  editor       = "Cardoso, M. Jorge and Feragen, Aasa and Glocker, Ben and Konukoglu, Ender and Oguz, Ipek and Unal, Gozde and Vercauteren, Tom",
  publisher    = "PMLR",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/RFF19"
}
@InProceedings{MKFA19,
  author       = "Monteiro, M. and K., Kamnitsas and Ferrante, E. and et al.,  ",
  title        = "TBI Lesion Segmentation in Head CT: Impact of Preprocessing and Data Augmentation",
  booktitle    = "MICCAI Brain Lesion Workshop",
  year         = "2019",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2019/MKFA19"
}
@InProceedings{CSLGFMGKR18,
  author       = "Cerrolaza, J. and Sinclair, M. and Li, Y. and Gómez, A. and Ferrante, E. and Matthew, J. and Gupta, C. and Knight, C. and Rueckert, D.",
  title        = "Deep learning with ultrasound physics for fetal skull segmentation.",
  booktitle    = "Biomedical Imaging (ISBI 2018), 2018 IEEE 15th International Symposium on",
  pages        = "564--567",
  year         = "2018",
  organization = "IEEE",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/CSLGFMGKR18"
}
@Article{PKFLGGR18,
  author       = "Parisot, S. and Ktena, S. I. and Ferrante, E. and Lee, M. and Guerrero, R. and Glocker, B. and Rueckert, D.",
  title        = "Disease prediction using graph convolutional networks: application to autism spectrum disorder and alzheimer’s disease.",
  journal      = "Medical Image Analysis",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/PKFLGGR18"
}
@Book{STFDMMPSPSS18,
  author       = "Stoyanov, D. and Taylor, Z. and Ferrante, E. and Dalca, A. and Martel, A. and Maier-Hein, L. and Parisot, S. and Sotiras, A. and Papiez, B. and Sabuncu, M. and Shen, L.",
  title        = "Graphs in Biomedical Image Analysis and Integrating Medical Imaging and Non-Imaging Modalities",
  series       = "Second International Workshop, GRAIL 2018 and First International Workshop, Beyond MIC 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings",
  year         = "2018",
  publisher    = "Springer",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/STFDMMPSPSS18"
}
@InProceedings{DF18,
  author       = "Debus, A. and Ferrante, E.",
  title        = "Left ventricle quantification through spatio-temporal CNNs",
  booktitle    = "Statistical Atlases and Computational Modeling of the Heart (STACOM 2018)",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/DF18"
}
@InProceedings{FOGM18,
  author       = "Ferrante, E. and Oktay, O. and Glocker, B. and Milone, D. H.",
  title        = "On the adaptability of unsupervised cnn-based deformable image registration to unseen image domains",
  booktitle    = "International Workshop on Machine Learning in Medical Imaging",
  pages        = "294--302",
  year         = "2018",
  organization = "Springer",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/FOGM18"
}
@MastersThesis{RFF18,
  author       = "Roulet, N. and Fernandez Slezak, D. and Ferrante, E.",
  title        = "Segmentación automática multi-tarea de imágenes médicas utilizando redes neuronales profundas",
  school       = "Facultad de Ciencias Exactas y Naturales - Universidad de Buenos Aires",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/RFF18"
}
@InProceedings{MF18,
  author       = "Mansilla, L. and Ferrante, E.",
  title        = "Segmentación multi-atlas de imágenes médicas con selección de atlas inteligente y control de calidad automático",
  booktitle    = "XXIV Congreso Argentino de Ciencias de la Computación (La Plata, 2018).",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/MF18"
}
@Article{FDMN18,
  author       = "Ferrante, E. and Dokania, P. and Marini, R. and Nikos , P.",
  title        = "Weakly-supervised learning of metric aggregations for deformable image registration",
  journal      = "IEEE journal of biomedical and health informatics",
  year         = "2018",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2018/FDMN18"
}
@Article{OFKHBCGCMDOKGR17,
  author       = "Oktay, O. and Ferrante, E. and Kamnitsas, K. and Heinrich, M. and Bai, W. and Caballero, J. and Guerrero, R. and Cook, S. and Marvao, A. and Dawes, T. and O Regan, D. and Kainz, B. and Glocker, B. and Rueckert, D.",
  title        = "Anatomically Constrained Neural Networks (ACNN): Application to cardiac image enhancement and segmentation",
  journal      = "IEEE Transactions on Medical Imaging",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/OFKHBCGCMDOKGR17"
}
@InProceedings{FDMP17a,
  author       = "Ferrante, E. and Dokania, P. and Marini, R. and Paragios, N.",
  title        = "Deformable registration through learning of context-specific metric aggregation",
  booktitle    = "8th International Workshop on Machine Learning in Medical Imaging",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/FDMP17a"
}
@InProceedings{KPFRLGR17,
  author       = "Ktena, S. I. and Parisot, S. and Ferrante, E. and Rajchl, M. and Lee, M. and Glocker, B. and Rueckert, D.",
  title        = "Distance metric learning using graph convolutional networks: Application to functional brain networks",
  booktitle    = "International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI)",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/KPFRLGR17"
}
@InProceedings{KBFMSPRLKRG17,
  author       = "Kamnitsas, K. and Bai, W. and Ferrante, E. and McDonagh, S. and Sinclair, M. and Pawlowski, N. and Rajchl, M. and Lee, M. and Kainz, B. and Rueckert, D. and Glocker, B.",
  title        = "Ensembles of multiple models and architectures for robust brain tumour segmentation",
  booktitle    = "MICCAI BrainLes 2017 ",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/KBFMSPRLKRG17"
}
@Article{FP17,
  author       = "Ferrante, E. and Paragios, N.",
  title        = "Graph based slice-to-volume deformable registration",
  journal      = "International Journal of Computer Vision",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/FP17"
}
@Book{CAFPDPJBSNSFSDS17,
  author       = "Cardoso, J. and Arbel, T. and Ferrante, E. and Pennec, X. and Dalca, A. and Parisot, S. and Joshi, S. and Batmanghelich, N.K. and Sotiras, A. and Nielsen, M. and Sabuncu, M. and Fletcher, T. and Shen, L. and Durrleman, S. and Sommer, S.",
  title        = "Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics",
  series       = "First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings",
  year         = "2017",
  publisher    = "Springer",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/CAFPDPJBSNSFSDS17"
}
@Article{KPFRLGR17a,
  author       = "Ktena, S. I. and Parisot, S. and Ferrante, E. and Rajchl, M. and Lee, M. and Glocker, B. and Rueckert, D.",
  title        = "Metric learning with spectral graph convolutions on brain connectivity networks",
  journal      = "NeuroImage",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/KPFRLGR17a"
}
@Article{FP17a,
  author       = "Ferrante, E. and Paragios, N.",
  title        = "Slice-to-volume medical image registration: A survey",
  journal      = "Medical Image Analysis",
  volume       = "39",
  year         = "2017",
  keywords     = "Bibliographical review, Slice-to-volume registration, Medical image registration, Medical image analysis",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/FP17a"
}
@InProceedings{PKFLGGR17,
  author       = "Parisot, S. and Ktena, S. I. and Ferrante, E. and Lee, M. and Guerrero Moreno, R. and Glocker, B. and Rueckert, D.",
  title        = "Spectral graph convolutions for population-based disease prediction",
  booktitle    = "International Conference on Medical Image Computing and  Computer-Assisted Interventions (MICCAI)",
  year         = "2017",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2017/PKFLGGR17"
}
@Article{PFGKPZ16,
  author       = "Paragios, N. and Ferrante, E. and Glocker, B. and Komodakis, N. and Parisot, S. and Zacharaki, E. I.",
  title        = "(Hyper)-graphical models in biomedical image analysis",
  journal      = "Medical Image Analysis",
  pages        = "102--106",
  year         = "2016",
  note         = "20th anniversary of the Medical Image Analysis journal (MedIA)",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2016/PFGKPZ16"
}
@InBook{KFPLNCRG16a,
  author       = "Kamnitsas, K. and Ferrante, E. and Parisot, S. and Ledig, C. and Nori, A. V. and Criminisi, A. and Rueckert, D. and Glocker, B.",
  title        = "DeepMedic for brain tumor segmentation",
  pages        = "138--149",
  year         = "2016",
  publisher    = "Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injurie",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2016/KFPLNCRG16a"
}
@InProceedings{SFTLKKP16,
  author       = "Shakeri, M. and Ferrante, E. and Tsogkas, S. and Lippe, S. and Kadoury, S. and Kokkinos, I. and Paragios, N.",
  title        = "Prior-based coregistration and cosegmentation",
  booktitle    = "International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI)",
  year         = "2016",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2016/SFTLKKP16"
}
@InProceedings{PSPF16,
  author       = "Porchetto, R. and Stramana, F. and Paragios, N. and Ferrante, E.",
  title        = "Rigid slice-to-volume medical image registration through markov random fields ",
  booktitle    = "Bayesian and Graphical Models for Biomedical Imaging Workshop, BAMBI - MICCAI",
  year         = "2016",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2016/PSPF16"
}
@InProceedings{STFLKPK16,
  author       = "Shakeri, M. and Tsogkas, S. and Ferrante, E. and Lippe, S. and Kadoury, S. and Paragios, N. and Kokkinos, I.",
  title        = "Sub-cortical brain structure segmentation using F-CNNS ",
  booktitle    = "International Symposium on Biomedical Imaging (ISBI)",
  year         = "2016",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2016/STFLKPK16"
}
@InProceedings{FFP15,
  author       = "Ferrante, E. and Fecamp, V. and Paragios, N.",
  title        = "Implicit planar and in-plane deformable mapping in medical images through high order graphs",
  booktitle    = "12th IEEE International Symposium on Biomedical Imaging (ISBI) ",
  year         = "2015",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2015/FFP15"
}
@Article{FFP15a,
  author       = "Ferrante, E. and Fecamp, V. and Paragios, N.",
  title        = "Slice-to-volume deformable registration: efficient one-shot consensus between plane selection and in-plane deformation",
  journal      = "International Journal for Computer Assisted Radiology and Surgery",
  year         = "2015",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2015/FFP15a"
}
@InProceedings{FP13,
  author       = "Ferrante, E. and Paragios, N.",
  title        = "Non-rigid 2D-3D medical image registration using markov random fields",
  booktitle    = "16th International Conference on Medical Image Computing and Computer Assisted Intervention  (MICCAI) ",
  year         = "2013",
  url          = "http://sinc.unl.loc/sinc/sinc-publications/2013/FP13"
}