@Article{VBFMS24, author = "Vitale, R. and Bugnon, L. A. and Fenoy, E. and Milone, D. H. and Stegmayer, G.", title = "Evaluating large language models for annotating proteins", journal = "Briefings in Bioinformatics", number = "3", volume = "25", year = "2024", url = "http://sinc.unl.loc/sinc/sinc-publications/2024/VBFMS24" } @Misc{RBF24, author = "Rufiner, H. L. and Bugnon, L. A. and Ferrero, M.", title = "Habla imaginada - Clasificación de señales de EEG", year = "2024", url = "http://sinc.unl.loc/sinc/sinc-publications/2024/RBF24" } @Article{BDGRPFCASM24, author = "Bugnon, L. A. and Di Persia, L. and Gerard, M. and Raad, J. and Prochetto, S. and Fenoy, E. and Chorostecki, U. and Ariel, F. and Stegmayer, G. and Milone, D. H.", title = "sincFold: end-to-end learning of short- and long-range interactions in RNA secondary structure", journal = "Briefings in Bioinformatics", number = "4", volume = "25", year = "2024", url = "http://sinc.unl.loc/sinc/sinc-publications/2024/BDGRPFCASM24" } @Article{SSBB23, author = "Sabattini, J. A. and Sturniolo, F. and Bollazzi, M. and Bugnon, L. A.", title = "AntTracker: A low-cost and efficient computer vision approach to research leaf-cutter ants behavior", journal = "Smart Agricultural Technology", year = "2023", url = "http://sinc.unl.loc/sinc/sinc-publications/2023/SSBB23" } @Article{BFERSM23, author = "Bugnon, L. A. and Fenoy, E. and Edera, A. and Raad, J. and Stegmayer, G. and Milone, D. H.", title = "Transfer learning: The key to functionally annotate the protein universe", journal = "Patterns", year = "2023", url = "http://sinc.unl.loc/sinc/sinc-publications/2023/BFERSM23" } @Article{SRBCSPBPS22, author = "Sabattini, J. A. and Reta, J. M. and Bugnon, L. A. and Cerrudo, J. and Sabattini, S. A. and Peñalva, A. and Bollazzi, M. and Paz, M. O. and Sturniolo, F.", title = "AntVideoRecord: Autonomous system to capture the locomotor activity of leafcutter ants", journal = "HardwareX", year = "2022", url = "http://sinc.unl.loc/sinc/sinc-publications/2022/SRBCSPBPS22" } @Article{BEPGRFRCGADMS22, author = "Bugnon, L. A. and Edera, A. and Prochetto, S. and Gerard, M. and Raad, J. and Fenoy, E. and Rubiolo, M. and Chorostecki, U. and Gabaldon, G. and Ariel, F. and Di Persia, L. and Milone, D. H. and Stegmayer, G.", title = "Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches", journal = "Briefing in Bioinformatics", year = "2022", url = "http://sinc.unl.loc/sinc/sinc-publications/2022/BEPGRFRCGADMS22" } @Article{BRMYAMS21, author = "Bugnon, L. A. and Raad, J. and Merino, G. and Yones, C. and Ariel, F. and Milone, D. H. and Stegmayer, G.", title = "Deep Learning for the discovery of new pre-miRNAs: helping the fight against COVID-19", journal = "Machine Learning with Applications", volume = "6", year = "2021", url = "http://sinc.unl.loc/sinc/sinc-publications/2021/BRMYAMS21" } @Article{YRBMS21, author = "Yones, C. and Raad, J. and Bugnon, L. A. and Milone, D. H. and Stegmayer, G.", title = "High precision in microRNA prediction: a novel genome-wide approach with convolutional deep residual networks", journal = "Computers in Biology and Medicine", volume = "134", year = "2021", url = "http://sinc.unl.loc/sinc/sinc-publications/2021/YRBMS21" } @Article{RBMS21, author = "Raad, J. and Bugnon, L. A. and Milone, D. H. and Stegmayer, G.", title = "miRe2e: a full end-to-end deep model based on transformers for prediction of pre-miRNAs", journal = "Bioinformatics", year = "2021", url = "http://sinc.unl.loc/sinc/sinc-publications/2021/RBMS21" } @Article{VCBRMLG20, author = "Vanrell, S. R. and Chelotti, J. O. and Bugnon, L. A. and Rufiner, H. L. and Milone, D. H. and Laca, E. and Galli, J.", title = "Audio recordings dataset of grazing jaw movements in dairy cattle", journal = "Data in Brief", volume = "30", year = "2020", url = "http://sinc.unl.loc/sinc/sinc-publications/2020/VCBRMLG20" } @Article{BYRGRMPDMS20, author = "Bugnon, L. A. and Yones, C. and Raad, J. and Gerard, M. and Rubiolo, M. and Merino, G. and Pividori, M. and Di Persia, L. and Milone, D. H. and Stegmayer, G.", title = "DL4papers: a deep learning approach for the automatic interpretation of scientific articles", journal = "Oxford Bioinformatics", year = "2020", url = "http://sinc.unl.loc/sinc/sinc-publications/2020/BYRGRMPDMS20" } @Article{BYMS20, author = "Bugnon, L. A. and Yones, C. and Milone, D. H. and Stegmayer, G.", title = "Genome-wide discovery of pre-miRNAs: comparison of recent approaches based on machine learning", journal = "Oxford Briefings in Bioinformatics", year = "2020", url = "http://sinc.unl.loc/sinc/sinc-publications/2020/BYMS20" } @Article{MRBYKCAMS20, author = "Merino, G. and Raad, J. and Bugnon, L. A. and Yones, C. and Kamenetzky, L. and Claus, J. and Ariel, F. and Milone, D. H. and Stegmayer, G.", title = "Novel SARS-CoV-2 encoded small RNAs in the passage to humans", journal = "Bioinformatics", month = "11", year = "2020", note = "btaa1002", url = "http://sinc.unl.loc/sinc/sinc-publications/2020/MRBYKCAMS20" } @InProceedings{BYRGRMPDMS19, author = "Bugnon, L. A. and Yones, C. and Raad, J. and Gerard, M. and Rubiolo, M. and Merino, G. and Pividori, M. and Di Persia, L. and Milone, D. H. and Stegmayer, G.", title = "Deep learning for reading and interpreting biomedical papers", booktitle = "A2B2C 10th Meeting", year = "2019", address = "Mendoza, Argentina", url = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYRGRMPDMS19" } @InProceedings{BYMS19a, author = "Bugnon, L. A. and Yones, C. and Milone, D. H. and Stegmayer, G.", title = "Deep neural architectures for highly imbalanced data in bioinformatics", booktitle = "Argentine Symposium on Data Science and Big Data, AGRANDA 2019, 48º JAIIO", year = "2019", address = "Universidad Nacional de Salta. Salta, Argentina", url = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYMS19a" } @Article{BYMS19, author = "Bugnon, L. A. and Yones, C. and Milone, D. H. and Stegmayer, G.", title = "Deep neural architectures for highly imbalanced data in bioinformatics", journal = "IEEE Transactions on Neural Networks and Learning Systems", year = "2019", url = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYMS19" } @Article{BYRMS19, author = "Bugnon, L. A. and Yones, C. and Raad, J. and Milone, D. H. and Stegmayer, G.", title = "Genome-wide hairpins datasets of animals and plants for novel miRNA prediction", journal = "Data in Brief (in press)", year = "2019", url = "http://sinc.unl.loc/sinc/sinc-publications/2019/BYRMS19" } @InProceedings{YBRMS19, author = "Yones, C. and Bugnon, L. A. and Raad, J. and Milone, D. H. and Stegmayer, G.", title = "MicroRNA prediction from genome-wide data with deep learning: a novel approach based on convolutional residual networks", booktitle = "A2B2C 10th Meeting", year = "2019", address = "Mendoza, Argentina", url = "http://sinc.unl.loc/sinc/sinc-publications/2019/YBRMS19" } @Article{MCKYBBOR18, author = "Macchiaroli, N. and Cucher , M and Kamenetzky, L. and Yones, C. and Bugnon, L. A. and Berriman, M. and Olson, P. and Rosenzvit, M. C.", title = "Identification and expression profiling of microRNAs in Hymenolepis.", journal = "International Journal for Parasitology", year = "2018", url = "http://sinc.unl.loc/sinc/sinc-publications/2018/MCKYBBOR18" } @Article{SDRGPYBRRM18, author = "Stegmayer, G. and Di Persia, L. and Rubiolo, M. and Gerard, M. and Pividori, M. and Yones, C. and Bugnon, L. A. and Rodriguez, T. and Raad, J. and Milone, D. H.", title = "Predicting novel microRNA: a comprehensive comparison of machine learning approaches", journal = "Briefings in Bioinformatics", year = "2018", url = "http://sinc.unl.loc/sinc/sinc-publications/2018/SDRGPYBRRM18" } @Article{BCM17, author = "Bugnon, L. A. and Calvo, R. A. and Milone, D. H.", title = "Dimensional affect recognition from HRV: an approach based on supervised SOM and ELM", journal = "IEEE Transactions on Affective Computing", year = "2017", url = "http://sinc.unl.loc/sinc/sinc-publications/2017/BCM17" } @InProceedings{ABM17, author = "Albornoz, E. M. and Bugnon, L. A. and Martínez, C. E.", title = "Snore Recognition Using a Reduced Set of Spectral Features", booktitle = "2017 XVI Workshop on Information Processing and Control (RPIC)", year = "2017", url = "http://sinc.unl.loc/sinc/sinc-publications/2017/ABM17" } @InProceedings{BCM14, author = "Bugnon, L. A. and Calvo, R. A. and Milone, D. H.", title = "A Method for Daily Normalization in Emotion Recognition", booktitle = "15th Argentine Symposium on Technology, AST 2014, 43º JAIIO", pages = "48--59", year = "2014", url = "http://sinc.unl.loc/sinc/sinc-publications/2014/BCM14" }